Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 AC097374.2-201ENST00000618617 1306 ntBASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 AL139384.1-201ENST00000612143 3047 ntBASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 AL096828.2-201ENST00000567259 1965 ntBASIC11.78□□□□□ -0.52
LRCOL1A6NCL2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
LRCOL1A6NCL2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 AC106795.1-205ENST00000512851 1056 ntBASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 SLC25A6P4-201ENST00000586535 553 ntBASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 AC022898.2-201ENST00000616822 1312 ntBASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC11.77□□□□□ -0.53
LRCOL1A6NCL2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LRCOL1A6NCL2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LRCOL1A6NCL2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LRCOL1A6NCL2 AC018470.1-201ENST00000624790 3129 ntBASIC11.76□□□□□ -0.53
LRCOL1A6NCL2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LRCOL1A6NCL2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC11.76□□□□□ -0.53
LRCOL1A6NCL2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LRCOL1A6NCL2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
LRCOL1A6NCL2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms