Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.08■□□□□ 0.65
CCDC66A2RUB6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 AC105020.1-201ENST00000435356 2205 ntBASIC19.08■□□□□ 0.65
CCDC66A2RUB6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC66A2RUB6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 Z99916.2-201ENST00000604037 246 ntBASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AC112497.1-201ENST00000624824 639 ntBASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC66A2RUB6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 AC063926.3-201ENST00000624734 5658 ntBASIC19.07■□□□□ 0.64
CCDC66A2RUB6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC66A2RUB6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 LINC00602-201ENST00000629776 2065 ntBASIC19.06■□□□□ 0.64
CCDC66A2RUB6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 AL024508.2-201ENST00000607749 1894 ntBASIC19.06■□□□□ 0.64
CCDC66A2RUB6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 FITM1-202ENST00000559294 800 ntBASIC19.06■□□□□ 0.64
CCDC66A2RUB6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC66A2RUB6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms