Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTPDC1A2A3K4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 AP002469.2-201ENST00000531724 424 ntBASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 MIR5100-201ENST00000579544 119 ntBASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 CROCCP2-202ENST00000412962 2773 ntBASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPDC1A2A3K4 AC106820.2-201ENST00000563775 3264 ntBASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 AC114341.1-201ENST00000618070 349 ntBASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPDC1A2A3K4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 BX276092.7-203ENST00000637198 1536 ntBASIC20.64■□□□□ 0.9
PTPDC1A2A3K4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 AF238378.1-201ENST00000526806 358 ntBASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPDC1A2A3K4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 RCN1P2-201ENST00000398357 915 ntBASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 AL023806.1-201ENST00000603994 1649 ntBASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PTPDC1A2A3K4 TP73-AS1-210ENST00000637775 1455 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms