Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL645728.2-201ENST00000641974 660 ntBASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC163A0A0D9SF12 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC163A0A0D9SF12 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC163A0A0D9SF12 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC163A0A0D9SF12 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AL096828.2-201ENST00000567259 1965 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AL671277.1-201ENST00000429656 993 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AC140658.5-201ENST00000438532 169 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 INGX-202ENST00000489074 768 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AC051619.7-201ENST00000568314 623 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AF228730.6-201ENST00000641497 218 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AC084121.3-201ENST00000641716 218 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AC105233.6-201ENST00000642093 218 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 AC009949.1-201ENST00000623048 1830 ntBASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC163A0A0D9SF12 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 BASP1P1-201ENST00000430708 665 ntBASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SPDYE11-202ENST00000450699 704 ntBASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SPDYE9P-201ENST00000570642 692 ntBASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SPDYE10P-202ENST00000612005 668 ntBASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SPDYE8P-202ENST00000612377 668 ntBASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC163A0A0D9SF12 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 AC055876.3-201ENST00000431496 288 ntBASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 AC005237.2-201ENST00000434368 219 ntBASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 AC093214.1-201ENST00000511688 1107 ntBASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 AC087641.1-201ENST00000557561 1021 ntBASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms