Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
IGKV3D-20A0A0C4DH25 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.08□□□□□ -0.31
IGKV3D-20A0A0C4DH25 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.08□□□□□ -0.31
IGKV3D-20A0A0C4DH25 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
IGKV3D-20A0A0C4DH25 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
IGKV3D-20A0A0C4DH25 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
IGKV3D-20A0A0C4DH25 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
IGKV3D-20A0A0C4DH25 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 PVRIG2P-201ENST00000435460 978 ntBASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 AC009947.2-201ENST00000444014 672 ntBASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 AC092865.7-201ENST00000641832 219 ntBASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 UBALD1-205ENST00000590891 2641 ntBASIC13.08□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 KRT8P47-201ENST00000604727 1398 ntBASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TSPY14P-201ENST00000303979 915 ntBASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 INGX-201ENST00000359239 846 ntBASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 MIR1238-201ENST00000408483 83 ntBASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 AC113404.2-201ENST00000507884 177 ntBASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.07□□□□□ -0.32
IGKV3D-20A0A0C4DH25 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms