Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 BX664615.1-201ENST00000443558 458 ntBASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC012306.2-201ENST00000609350 630 ntBASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 TERF1P1-201ENST00000311003 1181 ntBASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC113347.1-201ENST00000413321 391 ntBASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-3A0A0A0MS03 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 SPDYE13P-201ENST00000445314 798 ntBASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 ATP5G1P1-201ENST00000448724 379 ntBASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC109462.3-201ENST00000573934 613 ntBASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-3A0A0A0MS03 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms