Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV30A0A087WSZ9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 ZNF444P1-201ENST00000559497 298 ntBASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 AL645608.8-201ENST00000606034 2086 ntBASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV30A0A087WSZ9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TRAV30A0A087WSZ9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 HOMER2P1-201ENST00000455653 964 ntBASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 AP003733.1-201ENST00000491725 852 ntBASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 AC112698.1-201ENST00000510299 916 ntBASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 AC004263.2-201ENST00000617183 678 ntBASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV30A0A087WSZ9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms