Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC023141.13-201ENST00000604991 943 ntBASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AL355385.1-201ENST00000606123 409 ntBASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC046185.3-201ENST00000623228 1824 ntBASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 HMGN1P19-201ENST00000436976 333 ntBASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LEMD3Q9Y2U8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.99
LEMD3Q9Y2U8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
LEMD3Q9Y2U8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 CEND1P1-201ENST00000451006 455 ntBASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 CXCL1P1-201ENST00000502804 216 ntBASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LEMD3Q9Y2U8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 CNN2P11-201ENST00000429351 262 ntBASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 AL031432.2-201ENST00000566714 459 ntBASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 AL928711.1-201ENST00000570165 459 ntBASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LEMD3Q9Y2U8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LEMD3Q9Y2U8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms