Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 AL590627.1-203ENST00000421194 1026 ntBASIC18.55■□□□□ 0.56
CDH9Q9ULB4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 AL139327.4-201ENST00000612362 153 ntBASIC18.55■□□□□ 0.56
CDH9Q9ULB4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 AC243591.1-201ENST00000452967 1364 ntBASIC18.55■□□□□ 0.56
CDH9Q9ULB4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
CDH9Q9ULB4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 AC105339.3-201ENST00000560043 636 ntBASIC18.54■□□□□ 0.56
CDH9Q9ULB4 AC012640.2-201ENST00000561606 901 ntBASIC18.54■□□□□ 0.56
CDH9Q9ULB4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.54■□□□□ 0.56
CDH9Q9ULB4 AC006557.2-201ENST00000592985 1240 ntBASIC18.54■□□□□ 0.56
CDH9Q9ULB4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 AC116407.3-201ENST00000623905 1129 ntBASIC18.54■□□□□ 0.56
CDH9Q9ULB4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.54■□□□□ 0.56
CDH9Q9ULB4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 IL9RP2-201ENST00000423948 1312 ntBASIC18.53■□□□□ 0.56
CDH9Q9ULB4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 NCF1C-201ENST00000438382 1427 ntBASIC18.53■□□□□ 0.56
CDH9Q9ULB4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 AC120114.3-201ENST00000611923 658 ntBASIC18.53■□□□□ 0.56
CDH9Q9ULB4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms