Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 KRT18P27-201ENST00000427733 1299 ntBASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 RPL13AP23-201ENST00000480739 586 ntBASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AC145285.3-201ENST00000564603 959 ntBASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AC106730.1-201ENST00000566722 1090 ntBASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AC006557.2-201ENST00000592985 1240 ntBASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AL354751.1-201ENST00000412768 1863 ntBASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CLCF1Q9UBD9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 AP002414.3-201ENST00000589352 1468 ntBASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 MYCLP1-201ENST00000372451 1075 ntBASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 MIR574-201ENST00000385209 96 ntBASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 SIGLEC30P-201ENST00000455569 941 ntBASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 STK19B-204ENST00000512515 211 ntBASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 AL589182.2-201ENST00000619332 1049 ntBASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CLCF1Q9UBD9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCF1Q9UBD9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms