Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHD7Q9P2D1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHD7Q9P2D1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHD7Q9P2D1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 U91328.1-201ENST00000437528 223 ntBASIC18.45■□□□□ 0.54
CHD7Q9P2D1 RN7SL692P-201ENST00000464677 288 ntBASIC18.45■□□□□ 0.54
CHD7Q9P2D1 RN7SL589P-201ENST00000481268 310 ntBASIC18.45■□□□□ 0.54
CHD7Q9P2D1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 AL606495.2-201ENST00000605867 535 ntBASIC18.45■□□□□ 0.54
CHD7Q9P2D1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 AC010336.2-201ENST00000564226 506 ntBASIC18.45■□□□□ 0.54
CHD7Q9P2D1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHD7Q9P2D1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 AC002056.1-201ENST00000395613 760 ntBASIC18.44■□□□□ 0.54
CHD7Q9P2D1 AC004890.2-204ENST00000481968 304 ntBASIC18.44■□□□□ 0.54
CHD7Q9P2D1 AC079140.1-201ENST00000508039 487 ntBASIC18.44■□□□□ 0.54
CHD7Q9P2D1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 AC109462.3-201ENST00000573934 613 ntBASIC18.44■□□□□ 0.54
CHD7Q9P2D1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHD7Q9P2D1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 DDX43P3-201ENST00000441064 443 ntBASIC18.43■□□□□ 0.54
CHD7Q9P2D1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 SPDYE14P-201ENST00000442619 822 ntBASIC18.43■□□□□ 0.54
CHD7Q9P2D1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHD7Q9P2D1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.42■□□□□ 0.54
CHD7Q9P2D1 SPTLC1P1-201ENST00000447199 261 ntBASIC18.42■□□□□ 0.54
CHD7Q9P2D1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms