Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM7Q9NR12 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 AC006116.8-202ENST00000587620 1550 ntBASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 AC006504.4-201ENST00000592118 1568 ntBASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 AC103564.2-201ENST00000432853 1299 ntBASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 BCRP1-201ENST00000444246 691 ntBASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 AL031432.2-201ENST00000566714 459 ntBASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 AL928711.1-201ENST00000570165 459 ntBASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.59■□□□□ 0.73
PDLIM7Q9NR12 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 BX276092.7-203ENST00000637198 1536 ntBASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDLIM7Q9NR12 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.58■□□□□ 0.72
PDLIM7Q9NR12 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 AL353593.2-201ENST00000602529 1483 ntBASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 TSEN15P1-201ENST00000423257 515 ntBASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms