Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 MTCL1P1-201ENST00000446207 792 ntBASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 AC233702.3-201ENST00000578656 1387 ntBASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NECTIN3Q9NQS3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 KRT18P56-201ENST00000507275 550 ntBASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 AP000867.3-201ENST00000524675 377 ntBASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 AC011840.4-201ENST00000578471 627 ntBASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NECTIN3Q9NQS3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 AP005901.3-202ENST00000581653 237 ntBASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms