Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 KRT18P22-201ENST00000402024 1347 ntBASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC52A3Q9NQ40 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 AC092068.3-201ENST00000587894 2016 ntBASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 STARP1-201ENST00000397973 869 ntBASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC52A3Q9NQ40 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 AC124947.2-201ENST00000547118 1133 ntBASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC52A3Q9NQ40 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms