Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 CALY-203ENST00000368558 825 ntTSL 5 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 RNY3P9-201ENST00000384727 106 ntBASIC26.21■■□□□ 1.79
SENP3Q9H4L4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 AC097504.2-201ENST00000608088 454 ntBASIC26.21■■□□□ 1.79
SENP3Q9H4L4 AC026336.4-201ENST00000624565 1050 ntBASIC26.21■■□□□ 1.79
SENP3Q9H4L4 AC099654.9-201ENST00000637055 678 ntBASIC26.21■■□□□ 1.79
SENP3Q9H4L4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SENP3Q9H4L4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
SENP3Q9H4L4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SENP3Q9H4L4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 HIST2H3DP1-201ENST00000401004 416 ntBASIC26.2■■□□□ 1.78
SENP3Q9H4L4 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 GPX1P2-201ENST00000429271 606 ntBASIC26.2■■□□□ 1.78
SENP3Q9H4L4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 AC007342.1-201ENST00000565073 706 ntTSL 3 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 MTATP6P24-201ENST00000576835 677 ntBASIC26.2■■□□□ 1.78
SENP3Q9H4L4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 AL049844.2-201ENST00000604280 628 ntBASIC26.2■■□□□ 1.78
SENP3Q9H4L4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 AC134684.3-201ENST00000641758 218 ntBASIC26.2■■□□□ 1.78
SENP3Q9H4L4 AC068587.9-201ENST00000641814 219 ntBASIC26.2■■□□□ 1.78
SENP3Q9H4L4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SENP3Q9H4L4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 RNU6-304P-201ENST00000364855 107 ntBASIC26.19■■□□□ 1.78
SENP3Q9H4L4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 AC004967.1-201ENST00000453589 447 ntBASIC26.19■■□□□ 1.78
SENP3Q9H4L4 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 AC109597.1-201ENST00000564016 786 ntTSL 4 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 AFG3L1P-217ENST00000557444 2447 ntBASIC26.19■■□□□ 1.78
SENP3Q9H4L4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
SENP3Q9H4L4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 TP73-AS1-210ENST00000637775 1455 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 RN7SKP182-201ENST00000410772 298 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 HTR5BP-201ENST00000430851 1154 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 RPS2P1-201ENST00000434010 821 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AC005632.2-201ENST00000564271 828 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AL132656.3-201ENST00000606384 1595 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AC106052.1-201ENST00000608029 497 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AL355877.3-201ENST00000622820 899 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AC019226.2-201ENST00000625973 424 ntBASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC26.18■■□□□ 1.78
SENP3Q9H4L4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms