Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NXF3Q9H4D5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 PGAM5P1-201ENST00000518923 814 ntBASIC18.93■□□□□ 0.62
NXF3Q9H4D5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 FAM197Y3-203ENST00000618346 717 ntBASIC18.93■□□□□ 0.62
NXF3Q9H4D5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 AC006116.8-202ENST00000587620 1550 ntBASIC18.93■□□□□ 0.62
NXF3Q9H4D5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NXF3Q9H4D5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.92■□□□□ 0.62
NXF3Q9H4D5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 PGM5P2-202ENST00000637225 1043 ntBASIC18.92■□□□□ 0.62
NXF3Q9H4D5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
NXF3Q9H4D5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 AL390961.4-201ENST00000623958 2535 ntBASIC18.91■□□□□ 0.62
NXF3Q9H4D5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 AL591424.1-201ENST00000442569 1213 ntBASIC18.91■□□□□ 0.62
NXF3Q9H4D5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 KRT18P3-201ENST00000451602 1288 ntBASIC18.91■□□□□ 0.62
NXF3Q9H4D5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 AC006538.3-201ENST00000612495 578 ntBASIC18.91■□□□□ 0.62
NXF3Q9H4D5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
NXF3Q9H4D5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms