Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX6-2Q9C056 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX6-2Q9C056 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
NKX6-2Q9C056 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX6-2Q9C056 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-2Q9C056 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-2Q9C056 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-2Q9C056 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX6-2Q9C056 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX6-2Q9C056 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-2Q9C056 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX6-2Q9C056 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NKX6-2Q9C056 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-2Q9C056 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 AC006015.1-201ENST00000429970 570 ntBASIC14.26□□□□□ -0.13
NKX6-2Q9C056 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-2Q9C056 AL365203.3-201ENST00000609742 2057 ntBASIC14.26□□□□□ -0.13
NKX6-2Q9C056 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX6-2Q9C056 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms