Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
LIMD2Q9BT23 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 ECEL1P3-201ENST00000427961 737 ntBASIC10.51□□□□□ -0.73
LIMD2Q9BT23 ECEL1P2-202ENST00000465689 757 ntBASIC10.51□□□□□ -0.73
LIMD2Q9BT23 TMA16-209ENST00000513272 803 ntTSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 AC145285.6-201ENST00000604632 637 ntBASIC10.51□□□□□ -0.73
LIMD2Q9BT23 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 AC135776.1-201ENST00000319817 2481 ntBASIC10.51□□□□□ -0.73
LIMD2Q9BT23 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 AC138028.4-201ENST00000564984 1845 ntBASIC10.51□□□□□ -0.73
LIMD2Q9BT23 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 POR-209ENST00000439269 1858 ntTSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LIMD2Q9BT23 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 ANKRD20A18P-201ENST00000359341 492 ntBASIC10.5□□□□□ -0.73
LIMD2Q9BT23 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
LIMD2Q9BT23 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms