Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF559Q9BR84 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ZNF559Q9BR84 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.33■□□□□ 0.21
ZNF559Q9BR84 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF559Q9BR84 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 IGHGP-201ENST00000390555 1178 ntBASIC16.33■□□□□ 0.2
ZNF559Q9BR84 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 AP003733.1-201ENST00000491725 852 ntBASIC16.33■□□□□ 0.2
ZNF559Q9BR84 AP000867.3-201ENST00000524675 377 ntBASIC16.33■□□□□ 0.2
ZNF559Q9BR84 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 LINC00304-203ENST00000565008 1864 ntBASIC16.33■□□□□ 0.2
ZNF559Q9BR84 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF559Q9BR84 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 MIR662-201ENST00000384847 95 ntBASIC16.32■□□□□ 0.2
ZNF559Q9BR84 AL022342.1-201ENST00000400363 863 ntBASIC16.32■□□□□ 0.2
ZNF559Q9BR84 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 LINC00265-3P-201ENST00000447588 903 ntBASIC16.32■□□□□ 0.2
ZNF559Q9BR84 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 EMBP1-201ENST00000458200 901 ntBASIC16.32■□□□□ 0.2
ZNF559Q9BR84 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 AC112698.1-201ENST00000510299 916 ntBASIC16.32■□□□□ 0.2
ZNF559Q9BR84 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.32■□□□□ 0.2
ZNF559Q9BR84 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF559Q9BR84 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 AL023806.1-201ENST00000603994 1649 ntBASIC16.31■□□□□ 0.2
ZNF559Q9BR84 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 TSPY22P-201ENST00000427496 604 ntBASIC16.31■□□□□ 0.2
ZNF559Q9BR84 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF559Q9BR84 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms