Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
BPIFA3Q9BQP9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 IGHGP-201ENST00000390555 1178 ntBASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 RNF216P1-203ENST00000404404 2427 ntBASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BPIFA3Q9BQP9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 MYCLP1-201ENST00000372451 1075 ntBASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
BPIFA3Q9BQP9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 AC010460.3-201ENST00000511359 1579 ntBASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BPIFA3Q9BQP9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms