Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC006116.8-202ENST00000587620 1550 ntBASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 HNRNPDP1-201ENST00000439535 754 ntBASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 NCF1C-201ENST00000438382 1427 ntBASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP1Q96SZ6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP1Q96SZ6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 REXO1L11P-201ENST00000620964 1927 ntBASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 AL590627.1-203ENST00000421194 1026 ntBASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 AC105339.3-201ENST00000560043 636 ntBASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 MIR7706-201ENST00000613747 67 ntBASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 PGM5P2-202ENST00000637225 1043 ntBASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDK5RAP1Q96SZ6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDK5RAP1Q96SZ6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms