Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC074051.2-201ENST00000565115 352 ntBASIC20.81■□□□□ 0.92
NEK1Q96PY6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 BNIP3P18-201ENST00000593976 575 ntBASIC20.81■□□□□ 0.92
NEK1Q96PY6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEK1Q96PY6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEK1Q96PY6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEK1Q96PY6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEK1Q96PY6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEK1Q96PY6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.81■□□□□ 0.92
NEK1Q96PY6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 AP000867.3-201ENST00000524675 377 ntBASIC20.8■□□□□ 0.92
NEK1Q96PY6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 AC092329.2-201ENST00000598402 547 ntBASIC20.8■□□□□ 0.92
NEK1Q96PY6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.8■□□□□ 0.92
NEK1Q96PY6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEK1Q96PY6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.8■□□□□ 0.92
NEK1Q96PY6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 KRT8P10-201ENST00000450021 1447 ntBASIC20.79■□□□□ 0.92
NEK1Q96PY6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 AC106820.2-201ENST00000563775 3264 ntBASIC20.79■□□□□ 0.92
NEK1Q96PY6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 AC093458.2-201ENST00000623150 629 ntBASIC20.79■□□□□ 0.92
NEK1Q96PY6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEK1Q96PY6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NEK1Q96PY6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 MYCLP1-201ENST00000372451 1075 ntBASIC20.78■□□□□ 0.92
NEK1Q96PY6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 AC104819.1-201ENST00000504587 486 ntBASIC20.78■□□□□ 0.92
NEK1Q96PY6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NEK1Q96PY6 INTS4P1-201ENST00000438455 1935 ntBASIC20.78■□□□□ 0.92
NEK1Q96PY6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.78■□□□□ 0.92
NEK1Q96PY6 AC016396.2-201ENST00000562575 1417 ntBASIC20.78■□□□□ 0.92
NEK1Q96PY6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEK1Q96PY6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NEK1Q96PY6 AL353593.2-201ENST00000602529 1483 ntBASIC20.77■□□□□ 0.92
NEK1Q96PY6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
NEK1Q96PY6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NEK1Q96PY6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms