Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AC108073.2-201ENST00000464002 357 ntBASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AC211476.1-201ENST00000503899 468 ntBASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 YBX1P5-201ENST00000509441 847 ntBASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 IGHV3-65-201ENST00000523210 341 ntBASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AC008667.4-201ENST00000607370 168 ntBASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AC019129.2-201ENST00000609837 1235 ntBASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNGAP1Q96PV0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 PRSS29P-201ENST00000440800 595 ntBASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 SIGLEC30P-201ENST00000455569 941 ntBASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 AC100803.2-201ENST00000562459 1963 ntBASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNGAP1Q96PV0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 VN2R19P-201ENST00000442399 1052 ntBASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 RPS15P9-201ENST00000494093 319 ntBASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 REXO1L9P-201ENST00000604264 2108 ntBASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 AL354751.1-201ENST00000412768 1863 ntBASIC19.91■□□□□ 0.78
SYNGAP1Q96PV0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNGAP1Q96PV0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms