Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ODF3Q96PU9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 AC010460.3-201ENST00000511359 1579 ntBASIC12.99□□□□□ -0.33
ODF3Q96PU9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.99□□□□□ -0.33
ODF3Q96PU9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 AC103564.2-201ENST00000432853 1299 ntBASIC12.99□□□□□ -0.33
ODF3Q96PU9 RN7SL606P-201ENST00000472779 293 ntBASIC12.99□□□□□ -0.33
ODF3Q96PU9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ODF3Q96PU9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ODF3Q96PU9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 AC125634.1-201ENST00000438758 1403 ntBASIC12.98□□□□□ -0.33
ODF3Q96PU9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 AC007967.3-201ENST00000434308 558 ntBASIC12.98□□□□□ -0.33
ODF3Q96PU9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 AC104076.2-201ENST00000448912 469 ntBASIC12.98□□□□□ -0.33
ODF3Q96PU9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 AL136038.3-201ENST00000561909 1096 ntBASIC12.98□□□□□ -0.33
ODF3Q96PU9 AC111152.3-201ENST00000569699 673 ntBASIC12.98□□□□□ -0.33
ODF3Q96PU9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 AL592071.1-201ENST00000611956 408 ntBASIC12.98□□□□□ -0.33
ODF3Q96PU9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.98□□□□□ -0.33
ODF3Q96PU9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ODF3Q96PU9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ODF3Q96PU9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ODF3Q96PU9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms