Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 DRAXINP1-201ENST00000437611 948 ntBASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MS4A4EQ96PG1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 AC108860.2-201ENST00000562760 2183 ntBASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 AC009533.2-201ENST00000543664 586 ntBASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 TPSP2-201ENST00000561760 610 ntBASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 AP002414.4-201ENST00000589764 1148 ntBASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 Z69720.1-201ENST00000601483 472 ntBASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 AC019129.2-201ENST00000609837 1235 ntBASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 AL358472.4-201ENST00000633140 710 ntBASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.4■□□□□ 0.22
MS4A4EQ96PG1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MS4A4EQ96PG1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
MS4A4EQ96PG1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AC233702.3-201ENST00000578656 1387 ntBASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AC103564.2-201ENST00000432853 1299 ntBASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AP002383.4-201ENST00000442518 975 ntBASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AC091607.1-201ENST00000490318 1060 ntBASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AP005901.3-202ENST00000581653 237 ntBASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AC069148.1-201ENST00000608741 768 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms