Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TIMD4Q96H15 PMPCAP1-201ENST00000508114 1576 ntBASIC14.77□□□□□ -0.05
TIMD4Q96H15 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.77□□□□□ -0.05
TIMD4Q96H15 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 AC138028.4-201ENST00000564984 1845 ntBASIC14.76□□□□□ -0.05
TIMD4Q96H15 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 SIRPAP1-201ENST00000448467 1770 ntBASIC14.76□□□□□ -0.05
TIMD4Q96H15 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 AC003669.1-201ENST00000334569 611 ntBASIC14.76□□□□□ -0.05
TIMD4Q96H15 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 AL590627.1-203ENST00000421194 1026 ntBASIC14.76□□□□□ -0.05
TIMD4Q96H15 AL020989.1-201ENST00000422979 469 ntBASIC14.76□□□□□ -0.05
TIMD4Q96H15 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 AC021087.4-201ENST00000563761 564 ntBASIC14.76□□□□□ -0.05
TIMD4Q96H15 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 AD001527.2-201ENST00000622994 785 ntBASIC14.76□□□□□ -0.05
TIMD4Q96H15 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 AC100803.2-201ENST00000562459 1963 ntBASIC14.76□□□□□ -0.05
TIMD4Q96H15 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TIMD4Q96H15 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.76□□□□□ -0.05
TIMD4Q96H15 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 AL022342.1-201ENST00000400363 863 ntBASIC14.75□□□□□ -0.05
TIMD4Q96H15 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 NKAPP1-205ENST00000585790 367 ntBASIC14.75□□□□□ -0.05
TIMD4Q96H15 MTDHP4-201ENST00000600287 670 ntBASIC14.75□□□□□ -0.05
TIMD4Q96H15 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 BX640515.1-201ENST00000617215 977 ntBASIC14.75□□□□□ -0.05
TIMD4Q96H15 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 AC009113.1-201ENST00000570267 2443 ntBASIC14.75□□□□□ -0.05
TIMD4Q96H15 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.75□□□□□ -0.05
TIMD4Q96H15 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 AC104581.1-202ENST00000635932 2618 ntBASIC14.75□□□□□ -0.05
TIMD4Q96H15 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TIMD4Q96H15 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TIMD4Q96H15 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TIMD4Q96H15 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TIMD4Q96H15 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
TIMD4Q96H15 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TIMD4Q96H15 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms