Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL26A1Q96A83 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.03■□□□□ 0.32
COL26A1Q96A83 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL26A1Q96A83 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 AP005901.3-202ENST00000581653 237 ntBASIC17.02■□□□□ 0.32
COL26A1Q96A83 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 AC010327.4-202ENST00000591484 748 ntBASIC17.02■□□□□ 0.32
COL26A1Q96A83 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL26A1Q96A83 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.02■□□□□ 0.32
COL26A1Q96A83 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL26A1Q96A83 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL26A1Q96A83 AC093010.1-201ENST00000473625 1624 ntBASIC17.02■□□□□ 0.31
COL26A1Q96A83 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL26A1Q96A83 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL26A1Q96A83 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL26A1Q96A83 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.02■□□□□ 0.31
COL26A1Q96A83 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL26A1Q96A83 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
COL26A1Q96A83 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 MIR770-201ENST00000390219 98 ntBASIC17.01■□□□□ 0.31
COL26A1Q96A83 RPSAP43-201ENST00000402237 625 ntBASIC17.01■□□□□ 0.31
COL26A1Q96A83 NUS1P2-201ENST00000417358 873 ntBASIC17.01■□□□□ 0.31
COL26A1Q96A83 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 AC064862.7-201ENST00000604520 867 ntBASIC17.01■□□□□ 0.31
COL26A1Q96A83 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COL26A1Q96A83 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL26A1Q96A83 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
COL26A1Q96A83 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17■□□□□ 0.31
COL26A1Q96A83 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17■□□□□ 0.31
COL26A1Q96A83 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17■□□□□ 0.31
COL26A1Q96A83 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17■□□□□ 0.31
COL26A1Q96A83 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
COL26A1Q96A83 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COL26A1Q96A83 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL26A1Q96A83 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms