Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC27.07■■□□□ 1.92
CASKIN1Q8WXD9 AL513210.1-201ENST00000629608 234 ntBASIC27.07■■□□□ 1.92
CASKIN1Q8WXD9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC27.07■■□□□ 1.92
CASKIN1Q8WXD9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 KRT18P28-201ENST00000453838 1332 ntBASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC27.06■■□□□ 1.92
CASKIN1Q8WXD9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 AP002472.1-201ENST00000577490 586 ntBASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 HNRNPRP1-201ENST00000453465 1695 ntBASIC27.05■■□□□ 1.92
CASKIN1Q8WXD9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CASKIN1Q8WXD9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 SNHG9-202ENST00000564014 471 ntBASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
CASKIN1Q8WXD9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 CYMP-203ENST00000474680 1263 ntBASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 AC099522.2-201ENST00000607001 744 ntBASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC27.02■■□□□ 1.92
CASKIN1Q8WXD9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CASKIN1Q8WXD9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CASKIN1Q8WXD9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CASKIN1Q8WXD9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CASKIN1Q8WXD9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
CASKIN1Q8WXD9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CASKIN1Q8WXD9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms