Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 MIR3180-1-201ENST00000580374 94 ntBASIC18.05■□□□□ 0.48
SCG3Q8WXD2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 MIR3180-3-201ENST00000584616 94 ntBASIC18.05■□□□□ 0.48
SCG3Q8WXD2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 AC011270.2-201ENST00000624293 2550 ntBASIC18.05■□□□□ 0.48
SCG3Q8WXD2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SCG3Q8WXD2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 AC046158.3-201ENST00000624947 2558 ntBASIC18.04■□□□□ 0.48
SCG3Q8WXD2 AC022898.2-201ENST00000616822 1312 ntBASIC18.04■□□□□ 0.48
SCG3Q8WXD2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 AP002383.4-201ENST00000442518 975 ntBASIC18.04■□□□□ 0.48
SCG3Q8WXD2 AC005332.3-201ENST00000589904 676 ntBASIC18.04■□□□□ 0.48
SCG3Q8WXD2 AC024563.2-201ENST00000603282 481 ntBASIC18.04■□□□□ 0.48
SCG3Q8WXD2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 AC012313.10-201ENST00000623509 926 ntBASIC18.04■□□□□ 0.48
SCG3Q8WXD2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG3Q8WXD2 AC018695.7-201ENST00000624587 2492 ntBASIC18.04■□□□□ 0.48
SCG3Q8WXD2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 AC108860.2-201ENST00000562760 2183 ntBASIC18.03■□□□□ 0.48
SCG3Q8WXD2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 NUS1P1-201ENST00000446295 882 ntBASIC18.03■□□□□ 0.48
SCG3Q8WXD2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 AC111152.3-201ENST00000569699 673 ntBASIC18.03■□□□□ 0.48
SCG3Q8WXD2 RNF126P1-202ENST00000569893 925 ntBASIC18.03■□□□□ 0.48
SCG3Q8WXD2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 LINC01711-201ENST00000598340 967 ntBASIC18.03■□□□□ 0.48
SCG3Q8WXD2 IGHV3-41-201ENST00000613121 348 ntBASIC18.03■□□□□ 0.48
SCG3Q8WXD2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG3Q8WXD2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms