Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RTN4IP1Q8WWV3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTN4IP1Q8WWV3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTN4IP1Q8WWV3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.83□□□□□ -0.03
RTN4IP1Q8WWV3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RTN4IP1Q8WWV3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTN4IP1Q8WWV3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTN4IP1Q8WWV3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RTN4IP1Q8WWV3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.83□□□□□ -0.03
RTN4IP1Q8WWV3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 KRT18P57-201ENST00000443599 1254 ntBASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 AL157888.1-201ENST00000631930 593 ntBASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 AC022898.2-201ENST00000616822 1312 ntBASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RTN4IP1Q8WWV3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AC132938.6-201ENST00000623828 1655 ntBASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 YBX1P2-201ENST00000489612 999 ntBASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AL441883.1-201ENST00000566170 1045 ntBASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AC139887.4-201ENST00000607877 719 ntBASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.82□□□□□ -0.04
RTN4IP1Q8WWV3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms