Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 AC009947.1-201ENST00000444350 727 ntBASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHKBP1Q8TBC3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 AC073621.1-201ENST00000392730 636 ntBASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 AC006557.2-201ENST00000592985 1240 ntBASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHKBP1Q8TBC3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 AC093677.2-201ENST00000600169 1863 ntBASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 AL353593.2-201ENST00000602529 1483 ntBASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 AC007967.2-201ENST00000432613 625 ntBASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 AL139424.1-201ENST00000607572 797 ntBASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 AL049757.1-201ENST00000616842 1596 ntBASIC18.42■□□□□ 0.54
SHKBP1Q8TBC3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHKBP1Q8TBC3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms