Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17■□□□□ 0.31
KRT78Q8N1N4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
KRT78Q8N1N4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 AC010460.3-201ENST00000511359 1579 ntBASIC16.99■□□□□ 0.31
KRT78Q8N1N4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 AC007967.3-201ENST00000434308 558 ntBASIC16.99■□□□□ 0.31
KRT78Q8N1N4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 TPSP2-201ENST00000561760 610 ntBASIC16.99■□□□□ 0.31
KRT78Q8N1N4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 AC233702.3-201ENST00000578656 1387 ntBASIC16.99■□□□□ 0.31
KRT78Q8N1N4 LTB4R2-202ENST00000528054 3092 ntBASIC16.99■□□□□ 0.31
KRT78Q8N1N4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
KRT78Q8N1N4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 AL138688.1-201ENST00000624851 1594 ntBASIC16.98■□□□□ 0.31
KRT78Q8N1N4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 AP002383.4-201ENST00000442518 975 ntBASIC16.98■□□□□ 0.31
KRT78Q8N1N4 LINC00265-3P-201ENST00000447588 903 ntBASIC16.98■□□□□ 0.31
KRT78Q8N1N4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 TOB2P1-201ENST00000469761 992 ntBASIC16.98■□□□□ 0.31
KRT78Q8N1N4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT78Q8N1N4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 FAM220CP-201ENST00000395253 831 ntBASIC16.97■□□□□ 0.31
KRT78Q8N1N4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 MINOS1P3-201ENST00000457048 203 ntBASIC16.97■□□□□ 0.31
KRT78Q8N1N4 AC002558.1-201ENST00000488906 803 ntBASIC16.97■□□□□ 0.31
KRT78Q8N1N4 AC122714.2-201ENST00000502787 707 ntBASIC16.97■□□□□ 0.31
KRT78Q8N1N4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT78Q8N1N4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.97■□□□□ 0.31
KRT78Q8N1N4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms