Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 IGHV3-52-201ENST00000519770 353 ntBASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 AC011467.2-201ENST00000598425 242 ntBASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 AC141586.5-201ENST00000624546 2050 ntBASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 AC139713.2-201ENST00000641328 2723 ntBASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 SIRPAP1-201ENST00000448467 1770 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 NSUN5P1-202ENST00000421140 1535 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 NSUN5P2-203ENST00000457352 1529 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 MYCLP1-201ENST00000372451 1075 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC109462.3-201ENST00000573934 613 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC092329.2-201ENST00000598402 547 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC019129.2-201ENST00000609837 1235 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AL139327.4-201ENST00000612362 153 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC092119.3-201ENST00000612618 583 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 AC093458.2-201ENST00000623150 629 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 LYSMD4-203ENST00000378904 2122 ntBASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC65Q8IXS2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
CCDC65Q8IXS2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC65Q8IXS2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC65Q8IXS2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC65Q8IXS2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 AL023806.1-201ENST00000603994 1649 ntBASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 IGHV3-47-201ENST00000425060 335 ntBASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 AC104819.1-201ENST00000504587 486 ntBASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 AP000867.3-201ENST00000524675 377 ntBASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 AC074051.2-201ENST00000565115 352 ntBASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 TP73-AS1-210ENST00000637775 1455 ntBASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC65Q8IXS2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC65Q8IXS2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms