Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 ABCD1P5-201ENST00000445663 754 ntBASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 FDX1P1-201ENST00000449115 551 ntBASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 AC002558.1-201ENST00000488906 803 ntBASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.48■□□□□ 0.55
SCUBE3Q8IX30 PP12613-201ENST00000424958 2230 ntBASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 AL353593.2-201ENST00000602529 1483 ntBASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 IGHV3-52-201ENST00000519770 353 ntBASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SCUBE3Q8IX30 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 AP001269.4-201ENST00000609611 512 ntBASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 AP000867.4-201ENST00000641616 219 ntBASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 AC132938.5-201ENST00000624980 1813 ntBASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 PMPCAP1-201ENST00000508114 1576 ntBASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 LYSMD4-203ENST00000378904 2122 ntBASIC18.46■□□□□ 0.55
SCUBE3Q8IX30 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms