Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 AL645929.1-201ENST00000420084 975 ntBASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 AP001094.4-201ENST00000579008 2176 ntBASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC00346Q8IVM7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LINC00346Q8IVM7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.58■□□□□ 0.09
LINC00346Q8IVM7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.58■□□□□ 0.09
LINC00346Q8IVM7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LINC00346Q8IVM7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.58■□□□□ 0.09
LINC00346Q8IVM7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC00346Q8IVM7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 LINC01238-205ENST00000567549 1107 ntBASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LINC00346Q8IVM7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LINC00346Q8IVM7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms