Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 PCDH8P1-201ENST00000428983 2773 ntBASIC15.68■□□□□ 0.1
LRRC28Q86X40 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 ARMC10P1-201ENST00000313754 855 ntBASIC15.68■□□□□ 0.1
LRRC28Q86X40 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 FAM8A6P-201ENST00000407496 1135 ntBASIC15.68■□□□□ 0.1
LRRC28Q86X40 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 HOMER2P1-201ENST00000455653 964 ntBASIC15.68■□□□□ 0.1
LRRC28Q86X40 AC022616.7-201ENST00000525383 220 ntBASIC15.68■□□□□ 0.1
LRRC28Q86X40 AL441883.1-201ENST00000566170 1045 ntBASIC15.68■□□□□ 0.1
LRRC28Q86X40 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 DOC2GP-204ENST00000639052 2548 ntBASIC15.68■□□□□ 0.1
LRRC28Q86X40 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRRC28Q86X40 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRRC28Q86X40 KRT8P50-201ENST00000562022 1438 ntBASIC15.68■□□□□ 0.1
LRRC28Q86X40 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AC036111.1-201ENST00000533973 1582 ntBASIC15.67■□□□□ 0.1
LRRC28Q86X40 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AC092647.4-201ENST00000457211 535 ntBASIC15.67■□□□□ 0.1
LRRC28Q86X40 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 NTF6B-201ENST00000591913 560 ntBASIC15.67■□□□□ 0.1
LRRC28Q86X40 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.67■□□□□ 0.1
LRRC28Q86X40 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 AC011270.2-201ENST00000624293 2550 ntBASIC15.67■□□□□ 0.1
LRRC28Q86X40 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms