Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 FAM8A6P-201ENST00000407496 1135 ntBASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 SLC25A3P1-201ENST00000443844 931 ntBASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MRPL55Q7Z7F7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 SIRPAP1-201ENST00000448467 1770 ntBASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AC133963.1-201ENST00000504166 1679 ntBASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AC087499.1-201ENST00000418141 1075 ntBASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 KRT18P65-201ENST00000439811 1286 ntBASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 RASA4DP-201ENST00000460726 1199 ntBASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.34□□□□□ -0.59
MRPL55Q7Z7F7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms