Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 TSPY19P-201ENST00000418461 509 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 TPM4P1-201ENST00000436100 807 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 TSPY18P-201ENST00000441642 509 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 KRT16P4-201ENST00000453883 522 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 KRT18P31-201ENST00000506277 1292 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 AL121772.3-201ENST00000610840 674 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 AL691432.3-201ENST00000621860 400 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 TNRC18P3-201ENST00000441896 2691 ntBASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD3Q7Z3D4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 AL121894.2-201ENST00000602977 491 ntBASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 AL591684.3-201ENST00000605187 298 ntBASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 AC019129.2-201ENST00000609837 1235 ntBASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.66■□□□□ 0.42
LYSMD3Q7Z3D4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 AC091304.2-201ENST00000564639 760 ntBASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms