Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 TSSC2-201ENST00000450217 709 ntBASIC16.21■□□□□ 0.19
ZNF550Q7Z398 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 AC090616.6-201ENST00000582640 721 ntBASIC16.21■□□□□ 0.19
ZNF550Q7Z398 AL121672.3-201ENST00000608644 468 ntBASIC16.21■□□□□ 0.19
ZNF550Q7Z398 NPAP1P7-201ENST00000613027 823 ntBASIC16.21■□□□□ 0.19
ZNF550Q7Z398 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF550Q7Z398 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF550Q7Z398 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF550Q7Z398 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF550Q7Z398 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF550Q7Z398 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 AC141586.5-201ENST00000624546 2050 ntBASIC16.2■□□□□ 0.18
ZNF550Q7Z398 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 AL450487.1-201ENST00000426799 995 ntBASIC16.2■□□□□ 0.18
ZNF550Q7Z398 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 AC092329.2-201ENST00000598402 547 ntBASIC16.2■□□□□ 0.18
ZNF550Q7Z398 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 AC016734.2-201ENST00000624325 1377 ntBASIC16.2■□□□□ 0.18
ZNF550Q7Z398 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 AC139713.2-201ENST00000641328 2723 ntBASIC16.2■□□□□ 0.18
ZNF550Q7Z398 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF550Q7Z398 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 AL645608.8-201ENST00000606034 2086 ntBASIC16.19■□□□□ 0.18
ZNF550Q7Z398 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 KRT8P26-201ENST00000534154 1276 ntBASIC16.19■□□□□ 0.18
ZNF550Q7Z398 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 IGHV3-41-201ENST00000613121 348 ntBASIC16.19■□□□□ 0.18
ZNF550Q7Z398 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF550Q7Z398 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms