Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC098831.1-202ENST00000438821 336 ntBASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC105339.3-201ENST00000560043 636 ntBASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 AL049757.1-201ENST00000616842 1596 ntBASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB11FIP1Q6WKZ4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC009113.1-201ENST00000570267 2443 ntBASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC104109.2-201ENST00000602919 1418 ntBASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 SPDYE21P-201ENST00000413323 827 ntBASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 IGHV3-22-201ENST00000520721 359 ntBASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 AP002414.3-201ENST00000589352 1468 ntBASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.67■□□□□ 0.42
RAB11FIP1Q6WKZ4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 AL020989.1-201ENST00000422979 469 ntBASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 LAGE3P1-201ENST00000425356 484 ntBASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC109462.3-201ENST00000573934 613 ntBASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 TERC-201ENST00000602385 541 ntBASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC073592.4-201ENST00000623827 446 ntBASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 AL353593.2-201ENST00000602529 1483 ntBASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB11FIP1Q6WKZ4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB11FIP1Q6WKZ4 PRYP5-201ENST00000451909 266 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms