Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC005521.1-201ENST00000393351 872 ntBASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 AC010203.1-204ENST00000548782 407 ntBASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 AL138966.2-201ENST00000621997 464 ntBASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.18■□□□□ 0.18
TMEM53Q6P2H8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 BX664615.1-201ENST00000443558 458 ntBASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 COX11P1-201ENST00000489116 835 ntBASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 AC092865.7-201ENST00000641832 219 ntBASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 KRT8P50-201ENST00000562022 1438 ntBASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM53Q6P2H8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 AC104390.1-201ENST00000555663 520 ntBASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 AC024243.1-201ENST00000609234 778 ntBASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM53Q6P2H8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms