Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SWSAP1Q6NVH7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SWSAP1Q6NVH7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 AC104109.2-201ENST00000602919 1418 ntBASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 AC073621.1-201ENST00000392730 636 ntBASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 KRT18P27-201ENST00000427733 1299 ntBASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 SLC25A6P5-201ENST00000435663 894 ntBASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 RNA5SP415-201ENST00000517246 115 ntBASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 AC006557.2-201ENST00000592985 1240 ntBASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 AL356488.2-201ENST00000602755 427 ntBASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SWSAP1Q6NVH7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SWSAP1Q6NVH7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms