Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
REEP3Q6NUK4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
REEP3Q6NUK4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.41■□□□□ 0.22
REEP3Q6NUK4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
REEP3Q6NUK4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.41■□□□□ 0.22
REEP3Q6NUK4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.41■□□□□ 0.22
REEP3Q6NUK4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
REEP3Q6NUK4 AC011676.5-201ENST00000624864 2660 ntBASIC16.41■□□□□ 0.22
REEP3Q6NUK4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 HBZP1-201ENST00000354915 429 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 AC117947.1-201ENST00000427448 529 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 HOMER2P1-201ENST00000455653 964 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 AC012306.2-201ENST00000609350 630 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 AL139327.4-201ENST00000612362 153 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 AC097493.4-201ENST00000641197 219 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 AC084018.2-201ENST00000613093 2607 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
REEP3Q6NUK4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.4■□□□□ 0.22
REEP3Q6NUK4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 AC073508.3-201ENST00000619697 1419 ntBASIC16.39■□□□□ 0.21
REEP3Q6NUK4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 TSPY5P-201ENST00000426936 936 ntBASIC16.39■□□□□ 0.21
REEP3Q6NUK4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 AC097374.2-201ENST00000618617 1306 ntBASIC16.39■□□□□ 0.21
REEP3Q6NUK4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
REEP3Q6NUK4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 RNF152P1-201ENST00000397754 604 ntBASIC16.38■□□□□ 0.21
REEP3Q6NUK4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.38■□□□□ 0.21
REEP3Q6NUK4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms