Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT39Q6A163 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT39Q6A163 KRT8P10-201ENST00000450021 1447 ntBASIC18.99■□□□□ 0.63
KRT39Q6A163 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT39Q6A163 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.98■□□□□ 0.63
KRT39Q6A163 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
KRT39Q6A163 AL353593.2-201ENST00000602529 1483 ntBASIC18.98■□□□□ 0.63
KRT39Q6A163 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT39Q6A163 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
KRT39Q6A163 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.98■□□□□ 0.63
KRT39Q6A163 HCG4P8-203ENST00000443049 980 ntBASIC18.98■□□□□ 0.63
KRT39Q6A163 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.98■□□□□ 0.63
KRT39Q6A163 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.98■□□□□ 0.63
KRT39Q6A163 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
KRT39Q6A163 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
KRT39Q6A163 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
KRT39Q6A163 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
KRT39Q6A163 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KRT39Q6A163 CROCCP2-202ENST00000412962 2773 ntBASIC18.98■□□□□ 0.63
KRT39Q6A163 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT39Q6A163 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 OR6D1P-202ENST00000641007 5290 ntBASIC18.97■□□□□ 0.63
KRT39Q6A163 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.97■□□□□ 0.63
KRT39Q6A163 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT39Q6A163 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT39Q6A163 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 AD001527.2-201ENST00000622994 785 ntBASIC18.97■□□□□ 0.63
KRT39Q6A163 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT39Q6A163 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.97■□□□□ 0.63
KRT39Q6A163 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT39Q6A163 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
KRT39Q6A163 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT39Q6A163 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 AL645608.8-201ENST00000606034 2086 ntBASIC18.96■□□□□ 0.63
KRT39Q6A163 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KRT39Q6A163 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT39Q6A163 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT39Q6A163 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.96■□□□□ 0.63
KRT39Q6A163 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KRT39Q6A163 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT39Q6A163 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.96■□□□□ 0.63
KRT39Q6A163 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT39Q6A163 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
KRT39Q6A163 AL023806.1-201ENST00000603994 1649 ntBASIC18.96■□□□□ 0.63
KRT39Q6A163 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT39Q6A163 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT39Q6A163 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
KRT39Q6A163 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT39Q6A163 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KRT39Q6A163 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT39Q6A163 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KRT39Q6A163 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT39Q6A163 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT39Q6A163 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT39Q6A163 NUS1P1-201ENST00000446295 882 ntBASIC18.95■□□□□ 0.62
KRT39Q6A163 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT39Q6A163 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.95■□□□□ 0.62
KRT39Q6A163 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT39Q6A163 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms