Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 IFNL4P1-201ENST00000607083 540 ntBASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 AL732292.2-201ENST00000609649 430 ntBASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC39BQ5VTQ0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TTC39BQ5VTQ0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 FAM220CP-201ENST00000395253 831 ntBASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.33■□□□□ 0.52
TTC39BQ5VTQ0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 TPM4P1-201ENST00000436100 807 ntBASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 MIR5100-201ENST00000579544 119 ntBASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 AL591684.3-201ENST00000605187 298 ntBASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 KRT18P55-202ENST00000578578 1546 ntBASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC39BQ5VTQ0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 RCN1P2-201ENST00000398357 915 ntBASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 AC007967.3-201ENST00000434308 558 ntBASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 DDX43P3-201ENST00000441064 443 ntBASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 FAAHP1-202ENST00000446499 1238 ntBASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.31■□□□□ 0.52
TTC39BQ5VTQ0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms