Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC113410.3-201ENST00000623366 203 ntBASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC100803.2-201ENST00000562459 1963 ntBASIC14.01□□□□□ -0.17
FAM78BQ5VT40 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FAM78BQ5VT40 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14□□□□□ -0.17
FAM78BQ5VT40 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
FAM78BQ5VT40 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14□□□□□ -0.17
FAM78BQ5VT40 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
FAM78BQ5VT40 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 MESTP1-201ENST00000404287 994 ntBASIC14□□□□□ -0.17
FAM78BQ5VT40 MFAP1P1-201ENST00000442257 1255 ntBASIC14□□□□□ -0.17
FAM78BQ5VT40 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 PENK-204ENST00000518770 863 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 DUTP2-201ENST00000519164 463 ntBASIC14□□□□□ -0.17
FAM78BQ5VT40 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 SLC25A1P4-201ENST00000567977 778 ntBASIC14□□□□□ -0.17
FAM78BQ5VT40 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 AC105020.1-201ENST00000435356 2205 ntBASIC14□□□□□ -0.17
FAM78BQ5VT40 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14□□□□□ -0.17
FAM78BQ5VT40 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14□□□□□ -0.17
FAM78BQ5VT40 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 PCDHA1-201ENST00000378133 2726 ntBASIC13.99□□□□□ -0.17
FAM78BQ5VT40 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 MIR718-201ENST00000390190 70 ntBASIC13.99□□□□□ -0.17
FAM78BQ5VT40 CA15P1-201ENST00000481698 905 ntBASIC13.99□□□□□ -0.17
FAM78BQ5VT40 AC116562.2-201ENST00000507042 360 ntBASIC13.99□□□□□ -0.17
FAM78BQ5VT40 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 Z99916.2-201ENST00000604037 246 ntBASIC13.99□□□□□ -0.17
FAM78BQ5VT40 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.99□□□□□ -0.17
FAM78BQ5VT40 PCDHA14-201ENST00000506751 2298 ntBASIC13.99□□□□□ -0.17
FAM78BQ5VT40 HYMAI-201ENST00000635591 3347 ntBASIC13.99□□□□□ -0.17
FAM78BQ5VT40 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms