Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 TFAMP1-201ENST00000412727 736 ntBASIC21.95■■□□□ 1.1
RC3H1Q5TC82 FAM58DP-201ENST00000428076 619 ntBASIC21.95■■□□□ 1.1
RC3H1Q5TC82 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 RN7SL589P-201ENST00000481268 310 ntBASIC21.95■■□□□ 1.1
RC3H1Q5TC82 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 AF228730.6-201ENST00000641497 218 ntBASIC21.95■■□□□ 1.1
RC3H1Q5TC82 AC084121.3-201ENST00000641716 218 ntBASIC21.95■■□□□ 1.1
RC3H1Q5TC82 AC105233.6-201ENST00000642093 218 ntBASIC21.95■■□□□ 1.1
RC3H1Q5TC82 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RC3H1Q5TC82 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 AC046185.3-201ENST00000623228 1824 ntBASIC21.94■■□□□ 1.1
RC3H1Q5TC82 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 GPS2P2-201ENST00000430745 888 ntBASIC21.94■■□□□ 1.1
RC3H1Q5TC82 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 INGX-202ENST00000489074 768 ntBASIC21.94■■□□□ 1.1
RC3H1Q5TC82 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 AKAP8P1-201ENST00000434743 1349 ntBASIC21.94■■□□□ 1.1
RC3H1Q5TC82 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 KRT18P55-202ENST00000578578 1546 ntBASIC21.94■■□□□ 1.1
RC3H1Q5TC82 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RC3H1Q5TC82 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 AC015922.1-201ENST00000421102 1152 ntBASIC21.93■■□□□ 1.1
RC3H1Q5TC82 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 AC107918.2-201ENST00000530817 355 ntBASIC21.93■■□□□ 1.1
RC3H1Q5TC82 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RC3H1Q5TC82 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.92■■□□□ 1.1
RC3H1Q5TC82 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RC3H1Q5TC82 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms