Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP13A4Q4VNC1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP13A4Q4VNC1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ATP13A4Q4VNC1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP13A4Q4VNC1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP13A4Q4VNC1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 PRORSD1P-202ENST00000563365 2154 ntBASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 AD000864.1-201ENST00000624076 2295 ntBASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 AP005901.3-202ENST00000581653 237 ntBASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 AL138831.2-201ENST00000606564 490 ntBASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 AC116407.4-201ENST00000623319 1061 ntBASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP13A4Q4VNC1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 AC011840.4-201ENST00000578471 627 ntBASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 AC019129.2-201ENST00000609837 1235 ntBASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 AL139327.4-201ENST00000612362 153 ntBASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP13A4Q4VNC1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 PCED1CP-201ENST00000419887 785 ntBASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 BX276092.5-203ENST00000456199 560 ntBASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 AC109462.3-201ENST00000573934 613 ntBASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP13A4Q4VNC1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms