Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.56■□□□□ 0.88
GABPAQ06546 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
GABPAQ06546 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GABPAQ06546 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.56■□□□□ 0.88
GABPAQ06546 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABPAQ06546 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABPAQ06546 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABPAQ06546 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.55■□□□□ 0.88
GABPAQ06546 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABPAQ06546 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABPAQ06546 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABPAQ06546 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GABPAQ06546 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABPAQ06546 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.55■□□□□ 0.88
GABPAQ06546 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.55■□□□□ 0.88
GABPAQ06546 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.55■□□□□ 0.88
GABPAQ06546 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.55■□□□□ 0.88
GABPAQ06546 AC092865.5-201ENST00000545435 363 ntBASIC20.55■□□□□ 0.88
GABPAQ06546 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.55■□□□□ 0.88
GABPAQ06546 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.55■□□□□ 0.88
GABPAQ06546 LINC01451-201ENST00000623792 534 ntBASIC20.55■□□□□ 0.88
GABPAQ06546 LINC00304-203ENST00000565008 1864 ntBASIC20.55■□□□□ 0.88
GABPAQ06546 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GABPAQ06546 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.55■□□□□ 0.88
GABPAQ06546 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.55■□□□□ 0.88
GABPAQ06546 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.55■□□□□ 0.88
GABPAQ06546 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.55■□□□□ 0.88
GABPAQ06546 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 PTCHD3P3-201ENST00000403073 906 ntBASIC20.54■□□□□ 0.88
GABPAQ06546 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 ACTG1P4-201ENST00000425123 1122 ntBASIC20.54■□□□□ 0.88
GABPAQ06546 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.54■□□□□ 0.88
GABPAQ06546 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
GABPAQ06546 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.54■□□□□ 0.88
GABPAQ06546 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GABPAQ06546 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GABPAQ06546 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.53■□□□□ 0.88
GABPAQ06546 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.53■□□□□ 0.88
GABPAQ06546 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.53■□□□□ 0.88
GABPAQ06546 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.53■□□□□ 0.88
GABPAQ06546 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.53■□□□□ 0.88
GABPAQ06546 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GABPAQ06546 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
GABPAQ06546 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.53■□□□□ 0.88
GABPAQ06546 RNA5SP416-201ENST00000516838 111 ntBASIC20.53■□□□□ 0.88
GABPAQ06546 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.53■□□□□ 0.88
GABPAQ06546 AC040169.1-201ENST00000565382 521 ntBASIC20.53■□□□□ 0.88
GABPAQ06546 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.53■□□□□ 0.88
GABPAQ06546 AL139327.4-201ENST00000612362 153 ntBASIC20.53■□□□□ 0.88
GABPAQ06546 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.53■□□□□ 0.88
GABPAQ06546 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.53■□□□□ 0.88
GABPAQ06546 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.53■□□□□ 0.88
GABPAQ06546 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GABPAQ06546 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
GABPAQ06546 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.53■□□□□ 0.88
GABPAQ06546 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GABPAQ06546 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GABPAQ06546 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
GABPAQ06546 AL135999.2-201ENST00000622438 1686 ntBASIC20.52■□□□□ 0.88
GABPAQ06546 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.52■□□□□ 0.88
GABPAQ06546 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GABPAQ06546 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.52■□□□□ 0.88
GABPAQ06546 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GABPAQ06546 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.52■□□□□ 0.88
GABPAQ06546 PRSS29P-201ENST00000440800 595 ntBASIC20.52■□□□□ 0.88
GABPAQ06546 VN2R19P-201ENST00000442399 1052 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms