Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.17■□□□□ 0.82
HTRA3P83110 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.17■□□□□ 0.82
HTRA3P83110 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.17■□□□□ 0.82
HTRA3P83110 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.17■□□□□ 0.82
HTRA3P83110 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
HTRA3P83110 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HTRA3P83110 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.17■□□□□ 0.82
HTRA3P83110 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 GABARAPL3-202ENST00000624044 1851 ntBASIC20.17■□□□□ 0.82
HTRA3P83110 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HTRA3P83110 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HTRA3P83110 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HTRA3P83110 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.17■□□□□ 0.82
HTRA3P83110 AC009336.1-201ENST00000608941 1553 ntBASIC20.17■□□□□ 0.82
HTRA3P83110 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTRA3P83110 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTRA3P83110 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.16■□□□□ 0.82
HTRA3P83110 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HTRA3P83110 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HTRA3P83110 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HTRA3P83110 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.16■□□□□ 0.82
HTRA3P83110 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HTRA3P83110 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.16■□□□□ 0.82
HTRA3P83110 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.16■□□□□ 0.82
HTRA3P83110 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.16■□□□□ 0.82
HTRA3P83110 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HTRA3P83110 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTRA3P83110 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HTRA3P83110 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.16■□□□□ 0.82
HTRA3P83110 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HTRA3P83110 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.15■□□□□ 0.82
HTRA3P83110 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTRA3P83110 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
HTRA3P83110 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HTRA3P83110 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.15■□□□□ 0.82
HTRA3P83110 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.15■□□□□ 0.82
HTRA3P83110 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.15■□□□□ 0.82
HTRA3P83110 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.15■□□□□ 0.82
HTRA3P83110 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.15■□□□□ 0.82
HTRA3P83110 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.15■□□□□ 0.82
HTRA3P83110 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.15■□□□□ 0.82
HTRA3P83110 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.15■□□□□ 0.82
HTRA3P83110 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.15■□□□□ 0.82
HTRA3P83110 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.15■□□□□ 0.82
HTRA3P83110 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HTRA3P83110 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HTRA3P83110 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HTRA3P83110 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HTRA3P83110 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HTRA3P83110 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HTRA3P83110 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTRA3P83110 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTRA3P83110 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTRA3P83110 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.15■□□□□ 0.82
HTRA3P83110 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HTRA3P83110 AL158211.5-201ENST00000623583 2518 ntBASIC20.14■□□□□ 0.82
HTRA3P83110 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTRA3P83110 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HTRA3P83110 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.14■□□□□ 0.81
HTRA3P83110 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.14■□□□□ 0.81
HTRA3P83110 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HTRA3P83110 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HTRA3P83110 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HTRA3P83110 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTRA3P83110 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTRA3P83110 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.14■□□□□ 0.81
HTRA3P83110 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.14■□□□□ 0.81
HTRA3P83110 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.14■□□□□ 0.81
HTRA3P83110 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.14■□□□□ 0.81
HTRA3P83110 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.14■□□□□ 0.81
HTRA3P83110 AC004790.1-201ENST00000612686 536 ntBASIC20.14■□□□□ 0.81
HTRA3P83110 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.14■□□□□ 0.81
HTRA3P83110 AL139099.5-201ENST00000635274 300 ntBASIC20.14■□□□□ 0.81
HTRA3P83110 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTRA3P83110 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.14■□□□□ 0.81
HTRA3P83110 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
HTRA3P83110 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTRA3P83110 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HTRA3P83110 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HTRA3P83110 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTRA3P83110 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.13■□□□□ 0.81
HTRA3P83110 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTRA3P83110 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HTRA3P83110 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HTRA3P83110 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.13■□□□□ 0.81
HTRA3P83110 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HTRA3P83110 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.13■□□□□ 0.81
HTRA3P83110 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HTRA3P83110 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.13■□□□□ 0.81
HTRA3P83110 DFFBP1-201ENST00000433250 979 ntBASIC20.13■□□□□ 0.81
HTRA3P83110 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms